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Registros recuperados: 28
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Spatial, Ecological and Social Dimensions of Assessments for Bivalve Farming Management ArchiMer
Bacher, Cedric; Gangnery, Aline; Cugier, Philippe; Mongruel, Remi; Strand, Oivind; Frangoudes, Katia.
The general purpose of assessment is to provide decision-makers with the best valuable data, information, and predictions with which management decisions will be supported. Using case studies taken from four scientific projects and dealing with the management of marine bivalve resources, lessons learned allowed identifying some issues regarding assessment approaches. The selected projects also introduced methodological or institutional frameworks: ecosystem approach to aquaculture (EAA), system approach framework (SAF), marine spatial planning (MSP), and valuation of ecosystem services (ES). The study on ecosystem services linked ES to marine habitats and identified ES availability and vulnerability to pressures. The results were displayed as maps of...
Tipo: Text Palavras-chave: Ecosystem services; Marine spatial planning; Ecosystem approach to aquaculture; System approach; Modeling; Stakeholder involvement.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00470/58138/60608.pdf
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Modélisation environnementale de l'estuaire de la Seine ArchiMer
Bacq, Nicolas; Cugier, Philippe; Grasso, Florent; Le Gendre, Romain; Le Hir, Pierre; Lemoine, Jean-philippe; Riou, Philippe; Schulz, Elisabeth; Thouvenin, Benedicte; Verney, Romaric.
Dans le cadre du programme de recherche Seine-Aval 5, différentes stratégies de modélisation numérique sont mises en place pour aider à répondre aux questionnements scientifiques et sociétaux associés au fonctionnement physique, biologique, chimique et écologique de l'estuaire de la Seine (ex. projets RESET et HYMOSED). Les forçages météo-marins (vent, vague, marée) et hydrologique (débit) contrôlent le fonctionnement hydro-morpho-sédimentaire et biogéochimique de l'estuaire, modifiant ainsi les paramètres environnementaux de l’estuaire amont jusqu’à la baie de Seine (ex. nature des fonds, courant, turbidité, salinité, température, oxygène dissous, chlorophylle-a). La modélisation de ces paramètres, ainsi que leur évolution face à différents scénarios...
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Ano: 2015 URL: http://archimer.ifremer.fr/doc/00284/39480/37966.pdf
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Modèlisation des transferts de nutriments dans le continuum "Seine, Seine Aval, Baie de Seine" ArchiMer
Billen, Gilles; Cugier, Philippe; Garnier, Josette; Menesguen, Alain; Guillaud, Jean-francois; Durand, I.
Le processus d'eutrophisation des milieux marins côtiers, et le développement épisodiques de dinoflagellés qui en est une des manifestations, dépend de manière complexe de l'équilibre des flux d'azote, de phosphore et de silice en provenance des milieux terrestres du bassin versant. Ceux ci sont déterminés par la manière dont les activités humaines sur le bassin versant interagissent avec les processus naturels. La possibilité de prévoir l'effet sur l'eutrophisation marine des mesures prises pour l'amélioration de la qualité des eaux continentales dépend donc à la fois de notre connaissance du fonctionnement des milieux marins et de celui des bassins versants. En vue de développer les outils de modélisation nécessaire pour prévoir l'Etat de la Baie de...
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Ano: 2003 URL: http://archimer.ifremer.fr/doc/00106/21695/19274.pdf
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Modélisation du devenir à moyen terme dans l'eau et le sédiment des éléments majeurs (N, P, Si) rejetés par la Seine en Baie de Seine ArchiMer
Cugier, Philippe.
The Bay of Seine is a coastal ecosystem submitted to a large river input (Seine river), which brings important quantities of nutrients. This nutrient enrichment leads to frequent eutrophication events and, from the beginning of the eighties, regular toxic phytoplanktonic (Dynophysis) blooms are observed. In order to study the nutrient cycles (nitrogen, phosphorus, silica) and their contribution to phytoplanktonic stock regulation, a three dimensional model has been developed, based on the coupling between an hydrodynamic part taking into account sediment dynamics (SAM-3D) and an ecological part, which accounts for the main biological compartments and processes. This model is able to reproduce the main physical and biological characteristics of the...
Tipo: Text Palavras-chave: Bay of Seine (France); Dinoflagellates; Nutrients; Nutrients; Eutrophication; Sediments; Hydrodynamic; Mathematical models; Baie de (France); Seine; Dinoflagellés; Diatomées; Nutriments; Eutrophisation; Sédiments (géologie); Hydrodynamique; Modèles mathématiques.
Ano: 1999 URL: http://archimer.ifremer.fr/doc/1999/these-3220.pdf
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Impact des facteurs environnementaux et des pratiques conchylicoles sur la baie du Mont Saint-Michel et la production conchylicole. Etude de scenarii par modélisation. Programme Liteau 3. Rapport Final ArchiMer
Cugier, Philippe; Frangoudes, Katia; Blanchard, Michel; Mongruel, Remi; Perez, Jose; Le Mao, Patrick; Robin, T.; Fontenelle, Guy; Mazurie, Joseph; Cayocca, Florence; Pouvreau, Stephane; Olivier, F..
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00026/13707/10862.pdf
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Modélisation écologique tridimensionnelle (3D) de la baie de Seine (Manche, France) ArchiMer
Cugier, Philippe; Ménesguen, Alain; Guillaud, Jean-francois.
A three dimensional (3D) ecological model is developed and applied to the "baie de Seine" area. It consists of a 3D model for hydrodynamics and port (SiAM3D) coupled to an ecological model simulating nutrient cycles (nitrogen, phosphorus, silicon) and two phytoplanktonic classes (diatoms and flagellates). The model is validated by confronting simulations with nine year long series of measurements and then used to better understand the ecosystem functioning. It especially allows to show the role of the proportion of silicon with regard to nitrogen and phosphorus in the summer loadings of the Seine river on the more or less strong presence of flagellates in the river plume. The model was also used to test various hypotheses of reduction of nitrogen loading...
Tipo: Text Palavras-chave: Modèle 3D; Éléments nutritifs; Diatomées; Flagellés; Baie de Seine; 3D model; Nutrients; Diatoms; Flagellates; Baie de Seine.
Ano: 2001 URL: https://archimer.ifremer.fr/doc/00479/59101/61739.pdf
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Coupling a watershed model of the Seine river with a 3D ecological model of the English Channel in order to study eutrophication problems ArchiMer
Cugier, Philippe; Passy, Paul; Callens, Julie; Garnier, Josette; Riou, Philippe; Billen, Gilles; Le Gendre, Romain; Paris, Francois.
Eutrophication of the Seine river/estuary/bay continuum of the French coast of the English Channel is a subject of growing concern. Because of huge nutrient inputs from the Seine river, with an excess of nitrogen over phosphorus and silica, chlorophyll concentrations reach very high level and episodic blooms of toxic dinoflagellates are regularly observed. In order to better understand the relationship between these ecological processes and the human activities in the Seine watershed, two models have been developed and used in connection : 1/ a model describing nutrient (N, P, Si) transfer processes at the scale of the whole Seine Basin (SENEQUE/RIVERSTRAHLER, Thieu et al, 2009), allowing human activity (agricultural practices, waterscape management, urban...
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Ano: 2011 URL: http://archimer.ifremer.fr/doc/00061/17211/15019.pdf
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Le projet ANR-COMANCHE 2010-STRA-010. Interactions écosystémiques et impacts anthropiques dans les populations de COquilles Saint-Jacques (Pecten maximus) de la MANCHE. Rapport scientifique final ArchiMer
Foucher, Eric; Blanchard, Michel; Cugier, Philippe; Desroy, Nicolas; Dreanno, Catherine; Fauchot, Juliette; Fifas, Spyros; Guyader, Olivier; Jean, Frederic; Le Gallic, Bertrand; Riou, Philippe; Schapira, Mathilde; Thiebaut, Eric.
The King scallop Pecten maximus constitutes the first landed species in terms of tonnage and the second or third one in terms of value for the French fisheries. More than 90% of these landings come from the English Channel indicating that its exploitation is essential to local fleets. The COMANCHE project (Ecosystem Interactions and anthropogenic impacts on King scallops populations in the English Channel) proposed to improve the knowledge of the scallop within the Channel, through an ecosystem-based approach for fisheries, appealing to a wide range of scientific disciplines (physics, chemistry, genetics, ecology, geostatistics, modeling, economics ....). Researches on the spatial location of scallop beds, connectivity by larval dispersal between beds,...
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Ano: 2015 URL: http://archimer.ifremer.fr/doc/00251/36236/34797.pdf
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Projet OGIVE. Outils d'aide à la Gestion et à la Valorisation des Ecosystèmes conchylicoles de Basse-Normandie. Rapport final de phase III (2011-2013) ArchiMer
Gangnery, Aline; Cugier, Philippe; Le Gendre, Romain; Legendre, Aurelie; Maheux, Frank; Mary, Charlotte; Normand, Julien; Parrad, Sophie; Pierre-duplessix, Olivier; Picoche, Coralie; Pien, Sebastien; Rabiller, Emilie; Simon, Benjamin.
L’objectif général du projet OGIVE est d’acquérir des connaissances sur le fonctionnement des écosystèmes conchylicoles de Basse-Normandie dans le but d’établir une plateforme de données communes à l’ensemble des partenaires du projet. Ces connaissances sont ensuite utilisées pour développer des outils permettant de fournir des avis et expertises aux gestionnaires du Domaine Public Maritime. Le projet a ainsi pour objectif de contribuer au développement durable de la filière conchylicole en Basse-Normandie en optimisant la production conchylicole et en préservant la qualité environnementale des écosystèmes qui supportent cette activité. Le projet OGIVE a été structuré initialement autour de trois actions : 1) Acquisition de données : cette action a le...
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Ano: 2015 URL: https://archimer.ifremer.fr/doc/00253/36468/35010.pdf
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Connectivities with shellfish farms and channel rivers are associated with mortality risk in oysters ArchiMer
Gangnery, Aline; Normand, Julien; Duval, Cyrielle; Cugier, Philippe; Grangeré, Karine; Petton, Bruno; Petton, Sebastien; Orvain, Francis; Pernet, Fabrice.
Oyster diseases have major consequences on fisheries and aquaculture. In France, young Pacific oysters Crassostrea gigas are severely hit by the ostreid herpesvirus, whereas adults suffer mortalities presumably caused by pathogenic bacteria. Here we investigated the origin and spread of mortalities that affect both young and adult oysters, and we identified and compared their risk factors. Mortality was monitored in 2 age classes of oysters deployed in early spring at 39 sites spread over a 37 km2 surface area inside and outside of shellfish farms. Environmental data obtained from numerical modelling were used to investigate risk factors. Mortality of young oysters associated with ostreid herpesvirus occurred in the oyster farming area. Hydrodynamic...
Tipo: Text Palavras-chave: Aquaculture; Bivalve; Disease; Epidemiology and health; Ecological modelling; Hydrodynamic connectivity.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00588/69983/67896.pdf
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Nutriment Export Role on Eutrophisation. Indicators and model Scénarios (NEREIS) ArchiMer
Garnier, Josette; Billen, Gilles; Laverman, Anniet; Amsaleg, Céline; Tronquart, Olivier; Martinez, Anun; Mercier, Benjamin; Riou, Philippe; Le Gendre, Romain; Cugier, Philippe; Nedelec, Florence.
Les Objectifs de cette étude sont:1. Réactualiser la chaine de modélisation des têtes de bassins aux zones côtières et faire ainsi dialoguer le modèle du bassin de la Seine (Seneque/Riverstrahler) avec un modèle Estuaire/Baie de Seine (Mars 3D).2. Observer les effets, sur la basse Seine et l'estuaire en particulier, des nouveaux traitements dans les stations d'épuration du bassin.3. Quantifier les flux d'azote à la zone côtière par rapport à ceux du phosphore et de la silice.4. Synthétiser les données REPHY et RHLN pour valider l'indicateur ICEP développé au cours de la phase précédente de Seine-Aval, en cherchant à comprendre les déterminismes de la toxicité des blooms algaux.5. Construire des scénarios futurs permettant de tester, grâce au modèles,...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00018/12884/9847.pdf
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NEREIS (Nutrient Export Role on Eutrophication. Indicators and model Scenarios) - Rapport Seine-Aval ArchiMer
Garnier, Josette; Le Gendre, Romain; Passy, Paul; Paris, Francois; Billen, Gilles; Callens, Julie; Cugier, Philippe; Tronquart, Olivier; Romero, Estela; Riou, Philippe.
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00092/20336/17982.pdf
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Managing the Agri-Food System of Watersheds to Combat Coastal Eutrophication: A Land-to-Sea Modelling Approach to the French Coastal English Channel ArchiMer
Garnier, Josette; Riou, Philippe; Le Gendre, Romain; Ramarson, Antsiva; Billen, Gilles; Cugier, Philippe; Schapira, Mathilde; Théry, Sylvain; Thieu, Vincent; Ménesguen, Alain.
The continental coastal waters of the Eastern Channel, from Normandy to Hauts-de-France, are subject to the major influence of unbalanced nutrient inputs from inflowing rivers. Several episodes of harmful algal blooms (HABs) compromising fishing and shellfish farming activities have been observed at the coast. For a better understanding of how the land-to-sea aquatic continuum functions, the GRAFS-RIVERSTRAHLER river biogeochemical model was implemented to cover the watersheds of 11 rivers flowing into this area (including the Seine) and chained with the ecological marine ECO-MARS3D model, applied to the French Northern coastal zone. Human activities strongly impact on the functioning of coastal ecosystems. Specifically, for these fertile soils of Northern...
Tipo: Text Palavras-chave: Toxic microalgae; Pseudo-nitzschia spp.; River basins; Nutrient flows; Scenarios; Coastal zone ecosystem; Modelling.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00589/70076/68049.pdf
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Modelling the spatial heterogeneity of ecological processes in an intertidal estuarine bay: dynamic interactions between bivalves and phytoplankton ArchiMer
Grangere, Karine; Lefebvre, Sebastien; Bacher, Cedric; Cugier, Philippe; Menesguen, Alain.
Spatial patterns in ecological communities result from a combination of physical and biological factors. In an estuarine intertidal bay, spatial differences have been found in the structure of phytoplanktonic communities and in the biological performance of cultivated oysters. It has been hypothesised that trophic heterogeneity exists, although the mechanisms controlling it remain undefined. Spatial and temporal interactions in the structure of phytoplanktonic biomass and in the biological performance of cultivated oysters were highlighted in this estuarine intertidal bay using a 2-dimensional hydrodynamic model coupled to a nutrient-phytoplankton-zooplankton bivalve food web model. The coupled models allowed a reproduction in space and time of variations...
Tipo: Text Palavras-chave: Spatial heterogeneity; Hydrodynamics; Ecosystem model; Food supply; Bivalves; Dynamic energy budget model; Physiological status; Baie des Veys.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00017/12854/9819.pdf
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Influence of Crepidula fornicata on suspended particle dynamics in coastal systems: a mesocosm experimental study ArchiMer
Grasso, Florent; Carlier, Antoine; Cugier, Philippe; Verney, Romaric; Marzloff, Martin.
In coastal environments, strong feedback can exist between benthic fauna and sediment dynamics. Benthic populations can modify sediment dynamics through biofiltration and bioturbation, while hydro- and sediment dynamics directly determine local environmental conditions for benthic organisms. However, these complex feedbacks are difficult to study in situ. Here, we carried out mesocosm experiments to characterize the effects of a benthic species (the gastropod Crepidula fornicata) on mud dynamics under hydrodynamic conditions representative of their natural habitat. Different experimental tests related to the inclusion (or not) of dead or live crepidula reveal that biofiltration can increase particle settling up to 40%. Flocculation, which is strengthened...
Tipo: Text Palavras-chave: Laboratory experiments; Coastal processes; Physical-biological interactions; Benthic engineer species; Mud settling; Flocculation; Biofiltration; Organic matter.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00662/77403/79043.pdf
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Vertical distribution of brittle star larvae in two contrasting coastal embayments: implications for larval transport ArchiMer
Guillam, Morgane; Bessin, Claire; Blanchet-aurigny, Aline; Cugier, Philippe; Nicolle, Amandine; Thiébaut, Éric; Comtet, Thierry.
The ability of marine invertebrate larvae to control their vertical position shapes their dispersal pattern. In species characterized by large variations in population density, like many echinoderm species, larval dispersal may contribute to outbreak and die-off phenomena. A proliferation of the ophiuroid Ophiocomina nigra was observed for several years in western Brittany (France), inducing drastic changes on the benthic communities. We here studied the larval vertical distribution in this species and two co-occurring ophiuroid species, Ophiothrix fragilis and Amphiura filiformis, in two contrasting hydrodynamic environments: stratified in the bay of Douarnenez and well-mixed in the bay of Brest. Larvae were collected at 3 depths during 25 h within each...
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Ano: 2020 URL: https://archimer.ifremer.fr/doc/00641/75321/75846.pdf
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La Crépidule : identifier les mécanismes de sa prolifération et caractériser ses effets sur le milieu pour envisager sa gestion (Chantier : Baie de Saint-Brieuc) ArchiMer
Hamon, Dominique; Blanchard, Michel; Houlgatte, Eric; Blanchet, Aline; Gaffet, Jean-dominique; Cugier, Philippe; Menesguen, Alain; Bassoullet, Philippe; Cann, Philippe; Domalain, David; Haubois, Anne-gaelle.
La crépidule (Crepidula fornicata), mollusque gastéropode de la famille des Calyptraeidés, originaire de la côte atlantique d'Amérique du nord, a été introduite accidentellement sur le littoral français en plusieurs étapes (Blanchard, 1995, 1997). La plus importante d'entre elles, au début des années 70, est liée à l'importation massive de l'huître japonaise (Crassostrea gigas), en remplacement de l'huître portugaise (Crassostrea angulata) décimée par une épizootie. Cette espèce opportuniste a notamment proliféré au voisinage des principaux bassins ostréicoles de la Manche et de l'Atlantique. C'est en particulier le cas des zones conchylicoles infralittorales du golfe normano-breton où des évaluations de stocks font état de plusieurs centaines de milliers...
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Ano: 2002 URL: http://archimer.ifremer.fr/doc/00032/14295/11574.pdf
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A coupled biophysical model for the distribution of the great scallop Pecten maximus in the English Channel ArchiMer
Le Goff, Clement; Lavaud, Romain; Cugier, Philippe; Jean, Fred; Flye-sainte-marie, Jonathan; Foucher, Eric; Desroy, Nicolas; Fifas, Spyros; Foveau, Aurelie.
In this paper we used a modelling approach integrating both physical and biological constraints to understand the biogeographical distribution of the great scallop Pecten maximus in the English Channel during its whole life cycle. A 3D bio-hydrodynamical model (ECO-MARS3D) providing environmental conditions was coupled to (i) a population dynamics model and (ii) an individual ecophysiological model (Dynamic Energy Budget model). We performed the coupling sequentially, which underlined the respective role of biological and physical factors in defining P. maximus distribution in the English Channel. Results show that larval dispersion by hydrodynamics explains most of the scallop distribution and enlighten the main known hotspots for the population,...
Tipo: Text Palavras-chave: Population dynamic model; Ecophysiological model; English Channel; Pecten maximus; Spatial distribution.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00355/46642/46467.pdf
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Growth and distribution of the great scallop (Pecten maximus) in the English Channel: a modelling approach. ArchiMer
Le Goff, Clement; Lavaud, Romain; Cugier, Philippe; Jean, Frédéric; Flye Sainte Marie, Jonathan.
The great scallop Pecten maximus is currently the most important species in landings (as well in tons as in value) for the French inshore fleet of the English Channel. A French scientific program “COMANCHE” funded by the French National Research Agency (ANR) was conducted to improve our knowledge on the great scallop within its ecosystem, in an integrated way and over the whole area of the English Channel. In that context, the aim of this study is to better understand the determinism of the growth and distribution of the great scallop in the English Channel, integrating both physical and trophic constraints through a modelling approach. The used method is based on the coupling of a 3D hydrodynamical model (MARS3D developed at Ifremer) providing...
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Ano: 2013 URL: http://archimer.ifremer.fr/doc/00139/24987/23087.pdf
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Mapping the Intertidal Microphytobenthos Gross Primary Production Part I: Coupling Multispectral Remote Sensing and Physical Modeling ArchiMer
Méléder, Vona; Savelli, Raphael; Barnett, Alexandre; Polsenaere, Pierre; Gernez, Pierre; Cugier, Philippe; Lerouxel, Astrid; Le Bris, Anthony; Dupuy, Christine; Le Fouest, Vincent; Lavaud, Johann.
The gross primary production (GPP) of intertidal mudflat microphytobenthos supports important ecosystem services such as shoreline stabilization and food production, and it contributes to blue carbon. However, monitoring microphytobenthos GPP over a long-term and large spatial scale is rendered difficult by its high temporal and spatial variability. To overcome this issue, we developed an algorithm to map microphytobenthos GPP in which the following are coupled: (i) NDVI maps derived from high spatial resolution satellite images (SPOT6 or Pléiades), estimating the horizontal distribution of the microphytobenthos biomass; (ii) emersion time, photosynthetically active radiation (PAR), and mud surface temperature simulated from the physical model MARS-3D;...
Tipo: Text Palavras-chave: Microphytobenthos; Intertidal mudflat; Gross primary production; Remote sensing; NDVI; Modeling.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00643/75531/76429.pdf
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